Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MASHELDYRILGESMQTVEIELDPGETVIAEAGAMNYMTGDIRFTARMGDGSDGSLLGKLWSAGKRKLGGESVFMTHFTNEGQ-GKQHVAFAAPYPGSVVAVDLDDVGGRLFCQKDSFLCAAYGTRVGIAFTKRLGAGFFGGE--GFILQ--KLEGDGLVFVHAGGTLIRRQLNGETLRVDTGCLVAFTDGIDYDVQLAGGLKSMLFGGEGLLLTTLKGSGTVWLQ-SLPFSRLAGRIYDATFRAREEVRTNNG |
| 3TOJ Chain:A ((275-511)) | ---SGDLYRACLYERVLLALHDRAPQLKISDDR-LTVVGEKGYSMVRASHGVRK---------------GAWYFEITVDEMPPDTAARLGWSQPLGNLQAPLGYD--------KFSYSWRSKKGTKFHQSIGKHYSSGYGQGDVLGFYINLPEDGSSEIIFYKNG--------------VNQG--VAYKD---------------IFEGVYFPAISLYKSCTVSINFGPCFKYPPKDLTYRPMSDMGWGAVVEH |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TOJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -45718 for 1454 contacts (-31.4/contact) +
2D Compatibility (PS) -20201 + (NN) -4630 + (LL) 3276
1D Compatibility (HY) -6400 + (ID) 1500
Total energy: -75173.0 ( -51.70 by residue)
QMean score : 0.343
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