Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-MPQVLLSSKPPGLNSIDHAEPAGAPALEAAGCHCPGAVPTASAHAARANRGEPRDRVAGARCDFALSTGVRLAPLSPSSRPAPRTGSPHQFQRTLSTKKFASTQTTSSRWVSCNPSWRIQ
2LU2 Chain:A ((58-138))
EMTRLMVTEKQ---ESKNFSKMAKSQSFST------------------------RIEELGGSISFLTETGVTMIEL-------PKTVSEHDMDQLLHDILAAGGVVGLDSEVKLA------
General information:
TITO was launched using:
RESULT:
Template:
2LU2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 11293 for 603 contacts (18.7/contact) +
2D Compatibility (PS) -8375 + (NN) -3643 + (LL) 868
1D Compatibility (HY) -3600 + (ID) 900
Total energy: -4357.0 ( -7.23 by residue)
QMean score : 0.192
(partial model without unconserved sides chains):
PDB file :
Tito_2LU2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LU2-query.scw
PDB file :
Tito_Scwrl_2LU2.pdb
: