Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRKSWLTASLLALTVASPFAAADIQGHKAGDFIIRGGFATVDPDDSSSDIKLDGAKQRGTKATVDSDTQLGLTFTYMFADKWGVELVAATPFNHQVDVKGLGPGLDGKLADIKQLPPTLLLQYYPMGGTNSAFQPYGGLGVNYTTFFDEDLASNRKAQGFSSMKLQDSWGLAGELGFDYMLNEHALFNMAVWYMDIDTKASINGPSALGVNKTKVDVDVDPWVYMIGFGYKF |
| 2K0L Chain:A ((14-192)) | --------------------------PKDNTWYAGGKLGWSQYHDTGFYGNGF---QNNNGPTRNDQLGAGAFGGYQVNPYLGFEMGYDWLGRMAYKGS-------VDNGAFKAQGVQLTAKLGYPIT--DDLDIYTRLGGMVWRADSKGNYAST---GVSRSEHDTGVSPVFAGGVEWAVTRDIATRLEYQWVNNIGDAG------------TVGTRPDNGMLSLGVSYRF |
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General information:
TITO was launched using:
| RESULT:
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Template: 2K0L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -39300 for 1110 contacts (-35.4/contact) +
2D Compatibility (PS) -18967 + (NN) -1348 + (LL) 2492
1D Compatibility (HY) 1200 + (ID) 1150
Total energy: -57073.0 ( -51.42 by residue)
QMean score : 0.120
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