Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MHRSTGIGVSRWLGGLLGVALALPALALPQGCIELLAQAPRVDVVQGQQRDLRLAVPIERLAIGDPKIADVQLLDRRGFLVTGKEQGSTSLLIWTGCSPEPLRSLVEVEGRGSVDTRGAPAFTVGAAEELPNQVQTDIRFVEVSRSKLKQASTSFVRRGGNLWVLGAPGSLGDIKVNADGSGLGGTFGTGSSGFNLIFGGGKWLSFMNALEGSGFAYTLARPSLVAMSGQSASFLAGGEFPIPV-PNGTNDNVTIEYKEFGI--RLTLTPTVMNNRRIALKVAPEVSELDYSAGIQSGGVAVPALRVRRTDTSVMLADGESFVISGLTSSNSVSNVDKFPWLGDIPILGAFFRSTKLDKDDRELLMIVTPHLVQPLAADAQLPDLPGEGLRHYDPGFSRLYFLERGEYDGQQNDTGLSD |
3SHQ Chain:A ((4-316)) | ---KEVVVIVKWSGKEYPVDLTDQ-----DTVEVLRHEIFRKTQVRPERQKLL------------------------NLKYKGKTAADNVKI-----SALELKFKLMMVGSTEDNIGEVVDDFDDADEESVAHSAVYLAKVQRRVRDYKIKELAPPREGKKLLVLDIDYTLFDHRSPAET-----------------------------------GTELMRPYLHEFLTSAYED-----YDIVIWSATSMRWIEEKMRLLGVASNDNYKVMFYLDSTAMISVHVPERGVVDVKPLGVIWALYKQYNSSN---TIMFDDIRRNFL--MNPKSGLK-------------IRPFRQAHLNRGTDTELLKLS--DYLRKIAHHC--------------PDFNSLNHRKWEHYHP--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SHQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -61806 for 2302 contacts (-26.8/contact) +
2D Compatibility (PS) -31037 + (NN) -7827 + (LL) 3856
1D Compatibility (HY) -8800 + (ID) 2250
Total energy: -107864.0 ( -46.86 by residue)
QMean score : 0.091
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