Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKGNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPKAGLPLHLIQVSGLRGKGLKSLVKAPLELLKSLFQALRVIRQLRPVCVLGLGGYVTGPGGLAARLNGVPLVIHEQNAVAGTANRSLAPIARRVCEAFPDTFPASDKRLTTGNPVRGELFLDAHARAPLTGRRVNLLVLG-GSLGAEPLNKLLPEALAQVPLEIRPAIRHQAGRQHAEITAERYRTVAVEADVAPFISDMAAAYAWADLVICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVRSGAGRLLPQKSTGAAELAAQLSEVLMHPETLRSMADQARSLAKPEATRTVVDACLEVARG |
| 3S2U Chain:A ((3-355)) | --GNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPKAGLPLHLIQ--------------APLELLKSLFQALRVIRQLRPVCVLGLGGYVTGPGGLAARLNGVPLVIHEQNAVAGTANRSLAPIARRVCEAFPDTFPA---RLTTGNPVRGELFLDAHARAPLTGRRVNLLVLGGSLGAEPLNK-LLPEALAQVPLEIRPAIRHQAGRQHAEITAERYRTVAVEADVAPFISDMAAAYAWADLVICRAGALTVSELTAAGLPAFLVP-----DDHQTRNAEFLVRSGAGRLLPQKSTGAAELAAQLSEVLMHPETLRSMADQARSLAKPEATRTVVDACLEVA-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3S2U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -254885 for 2992 contacts (-85.2/contact) +
2D Compatibility (PS) -36163 + (NN) -17950 + (LL) 1284
1D Compatibility (HY) -41600 + (ID) 16050
Total energy: -365364.0 ( -122.11 by residue)
QMean score : 0.639
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