Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRTTPHLMLEPAFHPGLDTAGSGRDAIGLGAATSGRLDARHGTILSLEDINVSFD-GFKALRDLTLYIGVGELRCIIGPNGAGKTTLMDVITGKTRPQSGTAYFGDTLDLTRMSEVQIAQAGIGRKFQKPTVFEALSVFENLELAQRADKSVWASLRARLDGTQRERIEEVLATIRLLESRQRPAGLLSHGQKQFLEIGMLLVQEPQLLLLDEPVAGMTDAETEFTAELFKSLAR--KHSLMVVEHDMGFVGSIADHVTVLHQGHVLAEGSLAEVQADEQVIEVYLGR |
1Z47 Chain:A ((12-238)) | -----------------------------------------SMTIEFVGVEKIYPGGARSVRGVSFQIREGEMVGLLGPSGSGKTTILRLIAGLERPTKGDVWIGG-KRVTDLP---PQKRNVGLVFQNYALFQHMTVYDNVSFGLREKRV--------PKDEMDARVRELLRFMRLESYANRFPHELSGGQQQRVALARALAPRPQVLLFDEPFAAIDTQIRRELRTFVRQVHDEMGVTSVFVTHDQEEALEVADRVLVLHEGNVEQFGTPEEVYEKPG-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Z47.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -131967 for 1819 contacts (-72.5/contact) +
2D Compatibility (PS) -23808 + (NN) -8056 + (LL) 3944
1D Compatibility (HY) -13200 + (ID) 3000
Total energy: -176087.0 ( -96.80 by residue)
QMean score : 0.451
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