Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRIPSAIQLHKASKTLTLRYGE-DSYDLPAEFLRVHSPSAEVQGHGNPVLQ-YGKLNVGLVGVEPAGQYALKLSFDDGHDSGLFTWDYLYELATRKDQLWADYLAELASAGKSRDPDESVVKLML
3LUU Chain:A ((7-100))
-TQPLEIRPLMISRVMEVDWADGHTSRLTFEHLRVECPC---------AQIVTGKEHVSVVEVVPVGHYAVQLHFSDGHNTGIFTWEYLRRLDA-------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3LUU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44807 for 551 contacts (-81.3/contact) +
2D Compatibility (PS) -8772 + (NN) -3894 + (LL) 2564
1D Compatibility (HY) -4800 + (ID) 1500
Total energy: -61209.0 ( -111.09 by residue)
QMean score : 0.507
(partial model without unconserved sides chains):
PDB file :
Tito_3LUU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3LUU-query.scw
PDB file :
Tito_Scwrl_3LUU.pdb
: