Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSADKPEQPEHDQEMPLVSHLTELRTRLLRSVAAIFLIFAGLFYFSQKIYTLVSEPLRRFLPEGTSMIATDVASPFLAPFKLTMVVALFLAMPVILAQVWGFIAPGLYKHEKRVALPLLVSSIILFYAGMAFAYFLVFPMIFHFFASVTPEGVAMMTDINSYLDFVLTLFFAFGVAFEIPVATVLLIWIGVVDVDYLKKIRPYVIIGCFVVGMVLTPPDIFSQTMLAVPMWLLFEIGLLFGRLVRKRGEHPDDQPASDGDQPPATRQ |
| 2JWA Chain:A ((41-84)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCPAEQRASPLTSIISAVVGILLVVVLGVVFGILIKRRQQKIRK-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JWA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5585 for 155 contacts (-36.0/contact) +
2D Compatibility (PS) -4725 + (NN) -2883 + (LL) 19668
1D Compatibility (HY) -2800 + (ID) 400
Total energy: 3275.0 ( 21.13 by residue)
QMean score : -0.104
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