Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSQSNTLTVQILDKEYCINCPDDERANLESAARYLDGKMREIRSSGKVIGADRVAVMAALNITHDLLHRKERLDQESSSTRERVRELLDRVDRALANPADAGEA
1FFV Chain:A ((3-31))
---KKIITVNVNGKAQEKAVEPR--TLLIHFLRE----------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1FFV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10415 for 131 contacts (-79.5/contact) +
2D Compatibility (PS) -3120 + (NN) 134 + (LL) 5664
1D Compatibility (HY) 0 + (ID) 250
Total energy: -7987.0 ( -60.97 by residue)
QMean score : 0.519
(partial model without unconserved sides chains):
PDB file :
Tito_1FFV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FFV-query.scw
PDB file :
Tito_Scwrl_1FFV.pdb
: