Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNVLIVDDEPLARERLARLVGQLDGYRVLEPSASNGEEALTLIDSLKPDIVLLDIRMPGLDGLQVAARLCEREAPPAVIFCTAH--DEFALEAFQVSAVGYLVKPVRSEDLAEALKKASRPNRVQLAALTKPPASGGSGPRSHISARTRKGIELIPLEEVIFFIADHKYVTLRHAQGEVLLDEPLKALEDEFGERFVRIHRNALVARERIERLQRTPLGHFQLYLKGLDGDALTVSRRHVAGVRRLMHQL
3CZ5 Chain:C ((8-120))
--IMLVDDHPIVREGYRRLIERRPGYAVVAEAADAG-EAYRLYRETTPDIVVMDLTLPGPGGIEATRHIRQWDGAARILIFTMHQGSAFALKAFEAGASGYVTKSSDPAELVQAIE--------------------------------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3CZ5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -97598 for 867 contacts (-112.6/contact) +
2D Compatibility (PS) -12487 + (NN) -11812 + (LL) 10220
1D Compatibility (HY) -9600 + (ID) 1850
Total energy: -123127.0 ( -142.01 by residue)
QMean score : 0.729
(partial model without unconserved sides chains):
PDB file :
Tito_3CZ5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3CZ5-query.scw
PDB file :
Tito_Scwrl_3CZ5.pdb
: