Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTEKSQEPTAALDAEQVAAYLSQHPEFFVEHDELIPELRIPHQPGDAVSLVERQVRLLRERNIEMRHRLSQLMDVARENDRLFDKTRRLVLDLLDATSLEDVVSTVEDSLRHEFQVPYVSLILFSDSSVSVGRSVSSAEAHQAIGGLLSGGKTVCGVLRPHELAFLFGESDRDEIGSAAVVSLSF-QGLHGVLAIGSPDPQHYKSSLGTLFLGYVAEVLARVLPRFSSPLRSVR |
| 1VHM Chain:A ((123-179)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------ASNSEIVLPLVVKNQIIGVLDIDSTVFGRFTDE-DEQGLRQLVAQLEKVLATTDYKKF--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VHM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -24810 for 295 contacts (-84.1/contact) +
2D Compatibility (PS) -5929 + (NN) -3503 + (LL) 13348
1D Compatibility (HY) -2800 + (ID) 600
Total energy: -24294.0 ( -82.35 by residue)
QMean score : 0.442
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