Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHSLQAKILDPRLGSDFPLPQYATPGSAGLDLRAMLKEDSVLGPGQTLLIPTGLSIYIADPGLAALVLPRSGLGHKHGIVLGNLVGLIDSDYQGELMVSCWNRGESPFTIAVGERIAQLVLVPVVQAHFELVEAFDESQRGAGGFGHSGSH
3C3I Chain:B ((2-137))
-SSLLVK----KLVESATTPMRGSEGAAGYDISSV--EDVVVPAMGRIAVSTGISIRVPD-GTYGRIAPRSGLAYKYGIDV--LAGVIDSDYRGEVKVILYNTTERDYIIKKGDRIAQLILEQIVTPGVAVVLDLSDTARGSGGFG-----
General information:
TITO was launched using:
RESULT:
Template:
3C3I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -98250 for 873 contacts (-112.5/contact) +
2D Compatibility (PS) -14850 + (NN) -5552 + (LL) 80
1D Compatibility (HY) -9600 + (ID) 2700
Total energy: -130872.0 ( -149.91 by residue)
QMean score : 0.318
(partial model without unconserved sides chains):
PDB file :
Tito_3C3I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3C3I-query.scw
PDB file :
Tito_Scwrl_3C3I.pdb
: