Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRMRFSGISGCLSAAVLALGVGGAPVVQADALGDSLEQAHIRKATFAAPAWEGYTNAD-GSGLYWDLLKQVYAPYGLDVKFINMP-WNRANKLMTAGS---MV-DGVPGEIPGVE---GKLYAQLPIDIEYHGVMHAAKTP--FSGRASLTGKRVGWRHSYNLIPAEQR-DFTLVECVRPERCTEQVQNGELDFFLDEPDELEKQRSEAHLPADAYPI--AQLPPGKESFMTFADSASGRLLREVYDARVRQMAASGELRALYQRWNSEVPGAVQALSAQ |
| 1II5 Chain:A ((2-226)) | ---------------------------------------SAMALKVGVVGNPPFVFYGAFTGISLDVWRAVAESQKWNSEYVRQNSISAGITAVAEGELDILIGPISVTP--ERAAIEGITFTQ-PYFSSGIGLLIPGTATPLFRSVGDLKNKEVAVVRDTTAVDWANFYQADVRETNNLTAAITLLQKKQVEAVMFDRPALIYYTRQNP--NLNLEVTEIRVSL-EPYGFVLKEN---SPLQKTINVEMLNLLYSRVIAEFTERWLG------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1II5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -76402 for 1639 contacts (-46.6/contact) +
2D Compatibility (PS) -22715 + (NN) -5404 + (LL) 3616
1D Compatibility (HY) -6400 + (ID) 950
Total energy: -108255.0 ( -66.05 by residue)
QMean score : 0.457
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