Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNQTLNSSGTVESALNYSRGSTVHTAYLVLSSLAMFTCLCGMAGNSMVIWLLGF-RMHRNPFCIYILNLAAADLLFLFSMASTLSLETQPLVNTTDKVHELMKRLMYFAYTVGLSLLTAISTQRCLSVLFPIWFKCHRPRHLSAWVCGLLWTLCLLMNGLTSSFCSKFLKFNEDRCFR--------VDMVQAALIMGVLTPVMTLSSLTLFVWVRRSSQQ---------------------------------------------------------------------------------------------------------------------------------------------------------------WRRQPTRLFVVVLASVLVFLICSLPLSIYWFVLYWLSLPPEMQVL-CFSLSRLSSSVSSSANPVIYFLVGSRRSHRLPTRSLGTVLQQALREEPELEGGETPTVGTNEMGA |
| 3V2Y Chain:A ((58-495)) | ---------------------DKENSIKLTSVVFILICCFIILENIFVLLTIWKTKKFHRPMYYFIGNLALSDLLAGVAYTANLLLSGATTYKLTPAQWFLREGSMFVALSASVFSLLAIAIERYITMLK--------NNFRLFLLISACWVISLILGGLPIMGWNCIS--ALSSCSTVLPLYHKHYILFCT-TVFTLLLLSIVILYCRIYSLVRTRNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYASRSSENVALLKTVIIVLSVFIACWAPLFILLLLDVGCKVKTC-DILFRAEYFLVLAVLNSGTNPIIYTLTNKEMRRAFI-RIMGRPL------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3V2Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -189693 for 1862 contacts (-101.9/contact) +
2D Compatibility (PS) -26905 + (NN) -10484 + (LL) 3020
1D Compatibility (HY) -23200 + (ID) 2450
Total energy: -249712.0 ( -134.11 by residue)
QMean score : 0.162
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