Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKISNNSLGFLP--------TTFILVGIPGLESEHLWISVPFSLIYIII--FLGNGIILHVIRTDIALHQPMYLFLAMLALAEVRVSASTLPTVLGIFLFGNTEISLEACLFPDVLHPFFIHDGASCAAGHVFGPLYSHLQPTELHSYPDTAQGLWHR-----SYYRTEKHYAHGSVAHSLMASALLWPQCPLTFLLSAPQSY-LSCG-------NISVNNIYGIFIVTSTFGLDSLLIVISYGLILHTV--------LGIATGEGRKKALNTCGSHVCAVLAYYVPMIGLSIVHRLGHRVSPLLQAMMANAYLFFPPVV--NPIVYSIKTKEIHGAIVRMLLEKRRRV-------------------- |
| 1U19 Chain:A ((4-349)) | MNGTEGPNFYVPFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHG-----------------YFVFGPTGCNLEGFFATLGGEI---ALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFT-HQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPLGDDEASTTVSKTETSQVAPA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1U19.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -190393 for 2367 contacts (-80.4/contact) +
2D Compatibility (PS) -28976 + (NN) 3812 + (LL) 956
1D Compatibility (HY) -10000 + (ID) 850
Total energy: -225451.0 ( -95.25 by residue)
QMean score : 0.099
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