Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | --------------MLRVVEGIFIFVVVSESV--FGVLGNGFIGLVNCIDCAKNKLSTIGFILTGLAISRIFL---IWIII--TDGFIQIFSPNIYASGNLIEYISYFWV------IGNQSSMWFATSLSIFYFLK------IAN---FSNYIFLWLKSRTNMVLPFMIVFLLISSLLNFAYIAKI-------LNDYKTKNDTVWD--------LNMYKSEYFIKQILL------NLGVIFFFTLSLITCIFLIISLW-----RHNRQMQSNVTGLRDSNTEAHVKAMKVLI--SFIILFILYFIGMAIEISCF----------TVRENKLLLMFGMTTT-----AIYPWGHSFILILGNSKLKQASLRVLQQLKCCEKRKNLRVT------ |
3WA1 Chain:A ((1-389)) | TNYPLNTTPTSLNYNLPEISKKFYNLKNKYSRNGYGLSKTEFPSSIE--NCPSNEYSIMYDNKDPRFLIRFLLDDGRYIIADRDDGEVFDEAPT-YLDNNNHPIISRHYTGEERQKFEQVGSGDYITGEQFFQFYTQNKTRVLSNCRALDSRTILLSTAKIFPIYPPASETQLTAFVNSSFYAAAIPQLPQTSLLENIPEPTSLDDSGVLPKDAVRAVKGSALLPCIIVHDPNLNNSDKMKFNTYYLLEYKEYWHQLWSQIIPAHQTVKIQERTGISEVVQNSMIEDLNMYIGADFGMYFYLRSSGFKEQITRGLNRPLSQTTTQLGERVEEMEYYNSNDLDVRYVKYALAREFTLKRVNGEIVKNWVAVDYRMAGIQSYPNAPITNPLTLT |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3WA1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -279101 for 2199 contacts (-126.9/contact) +
2D Compatibility (PS) -32026 + (NN) 5412 + (LL) 464
1D Compatibility (HY) -5600 + (ID) 2850
Total energy: -313701.0 ( -142.66 by residue)
QMean score : 0.098
|
|
|