Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------MNGDHMVLGSSVTDKKAIILVTIL-------LLLRLVAIAGNGFITAALGVEWVLRRMLLPCDKLLVSLGASRFCLQSVVMGKTIYVFLHPMAFPYNPVLQFLAFQWDFLNAATLWSSTWLSVFYCVKIATFTHPVFFW-----------LKHKLSGWLPWMLFSSVGLSSFTTILFFIG----NHRMYQNYLRNH-------------------------------------------LQPWNVTGDSIR---------------------SYCEKFYLFPLKMITWT-----------MPTAVFFICMILLITSLG--RHRKKALLTTSGFREPSVQAH--IKALLALLSFAMLFISYFLSLVFSAAGI----------FPPLDFKFWVWESVIYLCA--------AVHPIILLFSNCRLRAVL----KSRRSSRCGTP------------- |
| 4BIJ Chain:A ((1-476)) | MSTQSNRNALVVAQLKGDFVAFLFVLWKALNLPVPTKCQIDMAKVLANGDNKKFILQAFRGIGKSFITCAFVVWSLWRDPQL--KILIVSASKERADANSIFIKNIIDLLPFLSELKPRPGQRDSVISFDVGPANPDHSPSVKSVGITGQLTGSRADIIIADDVEIPSNSATMGAREKLWTLVQEFAALLKPLPSSRVIYLGTPQTEMTLYKELEDNRGYTTIIWPALYPRTREENLYYSQRLAMLRAEYDENPEALAGTPTDPVRFDRDDLRERELEYGKAGFTLQFMLNPNLSDAEKYPLRLRDAIVAALDLEKAMHYQWLPNRQNIIEDLPNVGLKGDDLHTYHDCSNNSGQYQQKILVIDPSGRGKDETGYAVLYTLNGYIYLMEAGGFRDGYSDKTLELLAKKAKQWGVQTVVYESNFGDGMFGKVFSPILLKHHNCAMEEIRARGMKEMRICDTLEPVMQTHRLVIRDEV |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4BIJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -211637 for 2226 contacts (-95.1/contact) +
2D Compatibility (PS) -31703 + (NN) 5666 + (LL) -84
1D Compatibility (HY) -4800 + (ID) 3050
Total energy: -245608.0 ( -110.34 by residue)
QMean score : 0.065
|
|
|