Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLSAGLGLLMLVAVVEFLIGLIGNGSLVVWSFREWIRKFNWSSYNLIILGLAGCRFLLQWLIILDLSLFPLF--QSSRWLRYLSIFWVLVSQASLWFATFLSVFYCKKITTFDRPAYLWLKQRAYNLSLWCLLGYFIINLLLTVQIGLTFY--HPP---QGNSSIRYP-------FES-W-QYLYAFQLNSGSYLPLVVFLVSSGMLIVSLYTHHKKMKVHSA-----------------------------------------------------------------------------------------------------------------------------------------------------GRRDVRAKAHITALKSLGCFLLLHLVYIMASPFSITSKTY-P---PDL-TSVFIWETLMAAYPSLHSLILIMGIPRVKQTCQKILWKTVCARRCWGP |
| 3EML Chain:A ((23-472)) | -------VYITVELAIAVLAILGNVLVCWAVWLN---SNLQNVTNYFVVSLAAADIAVGVLAIPFAITISTGFCAACHGCLFIACFVLVLTQSSIFSLLAIAIDRYIAIRIPLR-YNGLVTG---TRAKG----IIAICWVLSFAIGLTPMLGWNNCGQ---SQGCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYRSTLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVLRQ----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EML.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -205822 for 2011 contacts (-102.3/contact) +
2D Compatibility (PS) -28182 + (NN) -13300 + (LL) 1092
1D Compatibility (HY) -19600 + (ID) 1950
Total energy: -267762.0 ( -133.15 by residue)
QMean score : 0.309
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