Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------------MVGDTLKLLSPLMTRYFFLLFYST-DSSDLNENQHPLDFDEMAFGKVKSGISFLIQTGVGIL-----GNSFLLCFYNLILFTGHKLRPTDLILSQLALANSMV-LFFKGIPQTMAAFGLKYLLNDTGCKFVFYYHRVG------TRVSLSTICLLNGFQAIKL-NPSICRWMEIKIRSPRFIDFCCLLCWAPHVLMNASVLLLVNGPLN---SKNSSAKNNYG---------YCSYKASKRFSSLHAVLYFSP-------------DFMSLGFMVWAS--GSMVFFLYRH-KQQVQHNHSNRLSCRPSQEARAT--------HTIMVLVSSFFVFYSV---HSFLTIWTTVVANPGQWIVTNSVLVA-------------------SCFPARSPFVLIMSDTHISQFCFACRTRKTLFPNLVVMP--------------------------------------- |
| 4GA6 Chain:A ((1-493)) | MKAKIRILDMFSGRYTVLINEEDAKEAKLHPDDLVKIEAGKKAVYGSVALSNLVGKGEVGISRDVLDLHNFSEGETVSVIPAGTPESVRYIKKKMHGEKLRKVEIEAIVRDIVDRKLRDIEISSFVTALEINGLDMDEIAALTIAMAETGDMLDIDRKPIMDVHSIGGVPGNKTNILVVPIVAAAGLTIPKTSSRAITSAAGTADVVEVFADVSFSLDEIKRIVEKVGACLVWGGALNLAPADDITIKAERALSIDPTGLMLASIMSKKYAMGSQYVLIDIPTGKGVKVETVEEARSLARDFIELGKRLGQYVEVAITYGGQPIGHTVGPALEAREALSALMTGKGPGSLIEKATGLAGILLEMGGVAPAGTGKKMAKEILESGKAWEKMKEIIEAQGGDPNIKPEEIPIGDKTYTFTAATSGYVTAIDNRAITAIARAAGAPEDKGAGIELYVKVGEKVKEGDPLFTIHAEHEARLDQAIVLARRTEPIRIE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GA6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -241974 for 2812 contacts (-86.1/contact) +
2D Compatibility (PS) -36170 + (NN) 756 + (LL) 0
1D Compatibility (HY) -1600 + (ID) 2850
Total energy: -281838.0 ( -100.23 by residue)
QMean score : 0.132
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