Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MASRYVAVGMI-LSQTVVGVLGSFSVLLHYLSFYCTGCRLR-STDLIVKHLIVANFLALRCKGVPQTMAAF-GVRYFLNALGCKLVFYLHRVGRGVSIGTTCLLSV--FQVITVSSRKSRWAKLKEKAPKHVGFSVLLCWIVCMLVNIIFPMYVTGKWNYTNITVNEDLGYCSGGGNN---KIAQTLRAMLLSFPD-VLCLGLMLWVSSSMVCILHRHKQRVQHIDRSDLSPRASPENRATQSILILVSTFVSSYTLSCLFQVCMALLD--NPNSLLVNTSALMSVCFPTLSPFVLMSCDPSVYRFCFAWKR |
| 1U19 Chain:A ((43-322)) | -------LAAYMFLLIMLGFPINFLTLYV----TVQHKKLRTPLNYILLNLAVADLFMVFGG-FTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVC-KPMSNF----R-FGENHAIMGVAFTWVMALACAAPPLV-GWSRYIP-----EGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQES-----ATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLC |
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General information:
TITO was launched using:
| RESULT:
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Template: 1U19.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -204594 for 2130 contacts (-96.1/contact) +
2D Compatibility (PS) -26873 + (NN) 1074 + (LL) 2496
1D Compatibility (HY) -2800 + (ID) 800
Total energy: -231497.0 ( -108.68 by residue)
QMean score : 0.142
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