Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MLKLVIIENMAEIMLFSLD--LLLFSTDILCFNFPSKMIKLPGFITI-QIFFYPQA--SFGISANTILLLFHIFTFVFSHRSKSIDMIISHLSLIHILLLFTQAILVSLDFFGSQNTQDDLRYKVIVFLNKVMRGLSICTPCLLSVLQAIISPSIFSLAKLKHPSASHILGFFLFSWVLNMFIGVIF---------------CCTLRLPPVKRGQSSVCHTALFLFAHELHPQETVFHTNDFEGCHLYRVHGPLKRLHGDYFIQTIRGYLSAFTQPAC-------PRVSPVKRASQAILLLVSFVFTYWVDFTFSFSGGVTWINDSLLVWLQVIVANSYAAISPLML-IYADNQIFKTLQMLWFKYLSPPKLMLKFNRQCGSTKK |
| 1JMU Chain:G ((1-365)) | MEVCLPNGHQIVDLINNAFEGRVSIYSAQ---EGWDKTISAQPDMMVCGGAVVCMHCLGVVGSLQRKLKHLPHHRCNQQIRHQDYVDVQFADRVTAHWKRGMLSFVCQMHAMMNDVSPEDLDRVRTEGGSLVELNWLQVDPNSMFRSIHSSWTDPLQVVDDLDTKLDQYWTALNLMIDSSDLVPNFMMRDPSHAFNGVRLEGDARQTQFSRTFDSRSSLEWGVMVYDYSELEHDPSKGRAYRKELVTPARDFGHFGLSHYSRATTPILGKMPAVFSGMLTGNCKMYPFIKGTAKLKTVRKLVDSVNHA-WGVEKIRYALG----PGGMTGWYNRTMQQAPIVLTPAALTMFSDTTKFGDLD--YPVMIGDPMILG----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JMU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -306545 for 2670 contacts (-114.8/contact) +
2D Compatibility (PS) -34063 + (NN) 1496 + (LL) 1888
1D Compatibility (HY) -400 + (ID) 1800
Total energy: -339424.0 ( -127.13 by residue)
QMean score : 0.306
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