Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEEEPVEKKWRIKRSAARFLAVQVAYSNIFMGYDKSTFELENCGLRNYVGKLADIFECEEFDYQFLEKLLYKVIRSGGEYDKIIEYYLHPSWSLLRLNLVSLSILRVAVCELANCDTPAP-VVINEYTNIASDLLDKPSEIGFINGLLDKAKSAVKLNKNS
4EYA Chain:H ((44-127))
--------------------------------------------------------------YEYAKKLVDTAVRHIEEIDSIIEKHL-KGWSIDRLGYVERNALRLGVAELIFLKSKEPGRVFIDIVDLVKKYADEKAG-KFVNGVLSAIYKAYITSS--
General information:
TITO was launched using:
RESULT:
Template:
4EYA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -55819 for 548 contacts (-101.9/contact) +
2D Compatibility (PS) -8402 + (NN) -1655 + (LL) 5280
1D Compatibility (HY) -6800 + (ID) 1350
Total energy: -68746.0 ( -125.45 by residue)
QMean score : 0.441
(partial model without unconserved sides chains):
PDB file :
Tito_4EYA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4EYA-query.scw
PDB file :
Tito_Scwrl_4EYA.pdb
: