Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIEQFLNNLILASSSERRIALLKQINIEPGLILPADIDEIPLRK--ELPKDYSIRMAKSKAEKIQSSN------PDYFVLGIDTVVACGRRILLKAKNIEQAEKYIRLLSGRRHRVYTSVCLLTPDRSK------QHIRTVVTIVKFKRLSEREIKYYLASEEWKNRAGGCNMQGLAGMFVLFLRGSYSSIIGLPLHETYCLLSNYFNLNLY
2P5X Chain:A ((5-203))
-------RVVLASASPRRQEILSNAGLRFEV-VPSKFKEKLDKASFATPYGYAMETAKQKALEVANRLYQKDLRAPDVVIGADTIVTVGGLILEKPVDKQDAYRMLSRLSGREHSVFTGVAIVHCSSKDHQLDTRVSEFYEETKVKFSELSEELLWEYVHSGEPMDKAGGYGIQALGGMLVESVHGDFLNVVGFPLNHFCKQLVKLYY----
General information:
TITO was launched using:
RESULT:
Template:
2P5X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -114323 for 1486 contacts (-76.9/contact) +
2D Compatibility (PS) -20308 + (NN) -5645 + (LL) 1260
1D Compatibility (HY) -11200 + (ID) 2800
Total energy: -153016.0 ( -102.97 by residue)
QMean score : 0.595
(partial model without unconserved sides chains):
PDB file :
Tito_2P5X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2P5X-query.scw
PDB file :
Tito_Scwrl_2P5X.pdb
: