Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLAETWALLILTLLEIILSIDNLIFISLAIDRVPNALRERVRIVGFALALQMRFVTLFFTSYILSMQKPIFYAASFNISVKDLLMIA-GGLFLIIKSFIELWNDIFSRKQVEKKIDIKSQLLLAVLQIILIDLVFSVDSLLTAIALTHSMVIIAIACVFSILAMIFLSSYTAQLIKSSSSLKIIAILFIVLVGVHLMLDGLHVELPKEYLYSSLTFALFVEVTSSIKKKVRCIKKKKQF
1FYE Chain:A ((1-229))
-----MELLLLSNS----TLPGKAWLEHALPLIANQLNGRRSAVFIPFAGVTQTWDEYTDKTAEVLAPLGVNVTGIHRVADPLAAIEKAEIIIVGGGNTFQLLKESRERGLLAPMADRVKRGALYIGWSAGANLACPTIRTTNDMPIVDPNGFDALDLFPLQINPHFTNTREQRIRELLVVAPELTVIGLPEGNWIQVSN-----GQAVLGGPNTTWVFKA-----GEEAVALEAGHRF
General information:
TITO was launched using:
RESULT:
Template:
1FYE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -315193 for 1882 contacts (-167.5/contact) +
2D Compatibility (PS) -22072 + (NN) 10315 + (LL) 2456
1D Compatibility (HY) 6400 + (ID) 1000
Total energy: -319094.0 ( -169.55 by residue)
QMean score : 0.165
(partial model without unconserved sides chains):
PDB file :
Tito_1FYE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FYE-query.scw
PDB file :
Tito_Scwrl_1FYE.pdb
: