Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTNILYRIDKQLSDFTKTEKIIADYILKNPHKIIDMTVNDLADVTNVSTASIVRFSRKMTHQGFQELKIAISRYLPEDIATNPHLELIENESVETLKNKMIARATNTMRFVATN-IMDAQIDAICDVLKNARTIFLFGFGASSLTIGDLFQKLSRIGLNVRLLHETHLLVSTFATHDDRDCMIFVTNQGSHSELQSIAQVATHYSIPIITISSTANNPVAQIADYALIYGRTDENEMRMAATTSLFAQLFTVDILYYRFVALNYHAILDCITQSKMALDNYRKHLATIDFKH
1JEO Chain:A ((12-175))
------------------------------------------------------------------------------------------------------NNILILKKFYTNDEWKNKLDSLIDRIIKAKKIFIFGVGRSGYIGRCFAMRLMHLGFKSYFVGETT-----TPSYEKDDLLILISGSGRTESVLTVAKKAKNINNNIIAIVCECG-NVVEFADLTIPLEV-KKSKYLPMGTTFEETALIFLDLVIAEIMKRLNLDESEIIKR-------------------
General information:
TITO was launched using:
RESULT:
Template:
1JEO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -144209 for 1291 contacts (-111.7/contact) +
2D Compatibility (PS) -17173 + (NN) -4137 + (LL) 10364
1D Compatibility (HY) -11200 + (ID) 1550
Total energy: -167905.0 ( -130.06 by residue)
QMean score : 0.482
(partial model without unconserved sides chains):
PDB file :
Tito_1JEO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JEO-query.scw
PDB file :
Tito_Scwrl_1JEO.pdb
: