Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNNKVLVTGGTGFVGMRIISRLLEQGYEVQTTIRDLSKADKVIKTMQDNGISTERLMFVEADLSQDEHWDEAMKDCKYVLSVASPVFFGKTDDAEVMAKPAIEGIQRILRAAEHA-GVKRVVMTANFGAVGFSNKDKNSITNESHWTNED-----EPGLSVYEKSKLLAEKAAWDFVENENTIVEFATINPVAIFGPSLDAHVSGSFHLLENLLNG-----SMKRVPQIPLNVVDVRDVAELHILAMTNEQANGKRFIATADGQINLLEIAKLIKEKRPEI--------------AQKVSTKKLPDFILSLGAKFNHQAKEGKLLLDM-NRNVSNERAKTLLGWEPIATQEEAILAAIDSMAKFHLI |
| 3BXX Chain:F ((8-325)) | ----VCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKV-KHLLDLPKAETHLTLWKADLADEGSFDEAIKGCTGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNI-QEHQLPVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKENN--IDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSIIRQGQF----VHLDDLCNAHIYLFENPKAEG-RYICSSHDCI-ILDLAKMLREKYPEYNIPTEFKGVDENLKSVCFSSKKLTD----LGFEFKYS------LEDMFTGAVDTCRAKGLL------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3BXX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -129876 for 2475 contacts (-52.5/contact) +
2D Compatibility (PS) -31221 + (NN) -7507 + (LL) 4100
1D Compatibility (HY) -24400 + (ID) 5350
Total energy: -194254.0 ( -78.49 by residue)
QMean score : 0.519
|
|
|