Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKILLIGY-GAMNQRVARLAEEKGHEIVGVIENTPKATTPYQQYQHIADVKDADVAIDFSNPNLLFPLLD--EEFHLPLVVATTGEKEKLLNKLDELSQNMPVFFSANMSYGVHALTKILAAAVPLLDDFDIELTEAHHNKKVDAPSGTLEKLYDVIVSLKENVTPVYDRHELNEKRQPQDIGIHSIRGGTIVGEHEVLFAGTDETIQITHRAQSKDIFANGAIQAAERLVNKPNGFYTFDNL
1VM6 Chain:B ((13-223))MKYGIVGYSGRMGQEIQKVFSEKGHELVLKVD-----------VNGVEELDSPDVVIDFSSPEALPKTVDLCKKYRAGLVLGTTALKEEHLQMLRELSKEVPVVQAYNFSIGINVLKRFLSELVKVLEDWDVEIVETHHRFKKDAPSGTAILL---------------------ESALGKSVPIHSLRVGGVPGDHVVVFGNIGETIEIKHRAISRTVFAIGALKAAEFLVGKDPGMYSFEEV


General information:
TITO was launched using:
RESULT:

Template: 1VM6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -116934 for 1674 contacts (-69.9/contact) +
2D Compatibility (PS) -22800 + (NN) -11148 + (LL) 1832
1D Compatibility (HY) -19600 + (ID) 4350
Total energy: -173000.0 ( -103.35 by residue)
QMean score : 0.582

(partial model without unconserved sides chains):
PDB file : Tito_1VM6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1VM6-query.scw
PDB file : Tito_Scwrl_1VM6.pdb: