Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRKESRVQAFQTLFQLEMKDSDLT--INEAISFIKDDNPDLDFEFIHWLVSGVKDHEPVLDETISPYLKDWTIARLLKTDRIILRMATYEI--LHSDTPAKVVMNEAVELTKQFSDDDHYKFINGVLSNIKK
4EYA Chain:F ((4-132))
--RKGARDTAFLVLYRWDLRGENPGELFKEVVEEKNIKNKDA-YEYAKKLVDTAVRHIEEIDSIIEKHLKGWSIDRLGYVERNALRLGVAELIFLKSKEPGRVFID-IVDLVKKYADEKAGKFVNGVLSAIYK
General information:
TITO was launched using:
RESULT:
Template:
4EYA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69057 for 941 contacts (-73.4/contact) +
2D Compatibility (PS) -12826 + (NN) -3214 + (LL) 208
1D Compatibility (HY) -6800 + (ID) 2100
Total energy: -93789.0 ( -99.67 by residue)
QMean score : 0.528
(partial model without unconserved sides chains):
PDB file :
Tito_4EYA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4EYA-query.scw
PDB file :
Tito_Scwrl_4EYA.pdb
: