Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVDVAFVCLGNICRSPMAEAIMRQRLKDRNIHDIKVHSRGTGSWNLGEPPHEGTQKILNKHNIPFDGMISELFEATD--DFDYIVAMDQSNVDNIKSINP-NLKGQLFKLLEFSNMEESDVPDPYY--TNNFEGVYDMVLSSCDNLIDYIVKDANLKEG
4LRQ Chain:C ((1-146))
MQKVLVVCMGNICRSPTAEAVLRAKAAQLKV-DVEVDSAGTIGYHQGNPPDARSKAAGEKRGYSFSGIKARKIRDEDFVKFDWILAADQENLAELKARCPQSHQHKLSLMLSHSDSEYQEIPDPYYGGERGFELVLDLVEDAAEQFL------------
General information:
TITO was launched using:
RESULT:
Template:
4LRQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -78660 for 1210 contacts (-65.0/contact) +
2D Compatibility (PS) -15096 + (NN) -8135 + (LL) 680
1D Compatibility (HY) -8400 + (ID) 2500
Total energy: -112111.0 ( -92.65 by residue)
QMean score : 0.514
(partial model without unconserved sides chains):
PDB file :
Tito_4LRQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4LRQ-query.scw
PDB file :
Tito_Scwrl_4LRQ.pdb
: