Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSELFSNDNIFLNVNVNSQNEAIEKAGKALVDSG-AVTDAYIQAMKDREQVVSTFMGNGLAIPHGTDEAKTNVIHSGLTLLQIPEGVDWDG---EVVKVVVGIAGKD---GEHLDLLSKIAITFSEEENVDRIVQAKSAEEIKQVFEEADA
3URR Chain:A ((6-153))
LAKILPLENVVIGLSVTSKKRVFEQAGLIFENQNGIARSTVTDNLFARERLGSTGLGEGVAIPHGRIK---GLKHPLAAFVRLAEPIPFEAPDGQPVSLLIFLLVPEQATQAHLEILSEIAQLLSDRDTRERLHTEPDRDELHRLLTQWQP
General information:
TITO was launched using:
RESULT:
Template:
3URR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -59336 for 1112 contacts (-53.4/contact) +
2D Compatibility (PS) -15244 + (NN) -3171 + (LL) 260
1D Compatibility (HY) -10000 + (ID) 1450
Total energy: -88941.0 ( -79.98 by residue)
QMean score : 0.558
(partial model without unconserved sides chains):
PDB file :
Tito_3URR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3URR-query.scw
PDB file :
Tito_Scwrl_3URR.pdb
: