Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MKKVVFLLLFMLG---GLEAHSDYCSDHC--EGTPDSRIPPMGFHFSF------VHSVKYYLQDPQKRDHKLEKCHKAFDSTLKVNFITKSFKKDCKHAQMALEQAQKETP----------------------------------------------------------- |
4Z2T Chain:A ((11-591)) | AETDVLIVGAGPAGAMSATLLASLGIRSLMINRWRSTSPGPRSHIINQRTMEILRDIGLEESAKSLAVPKEYMGEHVYATSLAGEEFGRIPAWASHPQAHAEHELASPSRYCDLPQLYFEPMVVSEAALRGADVRFLTEYLGHVEDQDGVTARLLDHVSGAEYEVRAKYIIGADGAHSLVAQNAGLPFEGQMGGSINIEFSADLSSLCEHRKGDMYYMFVAALRMIRPWNKWICVWGEITKEEAKKIIHEIIGTDEIPVEVGPISTWTINQQYAVRNTSGRVFCMGDAVHRHTPMGGLGLNTSVQDAYNLAWKLALVLKGTAAPTLLDSYDAERSPVAKQIVERAFKSLSTFPPVFEALSLPPAPTESEMAEALVRLKDASEEGAKRRAALRKAMDATIIGLGGGHGVELNQRYVSRAVFPDGTPDPGFVRDQEFFYQASTRPGAHLPHVWLTENQRRISTLDLCGKG-RFTLLTGLSGAAWKHEAEQVSQSLGIELKVCVIGPGQEFVDTYGEYAKISEIGESGALLVRPDMFIAFRAKDASREGLEQLNVAVKSILGR |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Z2T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 10304 for 456 contacts (22.6/contact) +
2D Compatibility (PS) -10319 + (NN) -187 + (LL) 132
1D Compatibility (HY) -2400 + (ID) 1200
Total energy: -3670.0 ( -8.05 by residue)
QMean score : 0.105
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