Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLISIAFLLVLCLLNYSSFRMLKSFLTLKKISRYAYLGFFILLSAGEATFVFYRNVMPSHLFVLTSACSFVSFIAFVFSLSFYGFSYSVEKIDFLPSRRKGLKNFLRIGFYLALLGYFWRGFYEGLARPKIKETPIYLDKLDKELKIILLTDMHVGSLLQK---------DFVNYIVEEVNQKEVDMVLIGGDLVDENIE---KVKSFLLPLNNLK-STHGTFYVPGNHEYYHGIE--PILSFLNTLDMTILGNEC-VHL-G-GINLCGVYDYFARKRQDFAPDIDKALKKRDSSKPTILLAHQPKQIR-------SLKESHSIDLVLSGHTHAGQIFPFSLLVKLAQTYLHGLYKHSGTTQIYVSSGAGYWGIPLRFLAPSEIAYLRLLPKNQA |
3AV0 Chain:A ((18-213)) | ---------------------------------------------------------------------------------------------------------------------------------------------GSHMMFVHIADNHLGYRQYNLDDREKDIYDSFKLCIKKILEIKPDVVLHSGDLFNDLRPPVKALRIAMQAFKKLHENNIKVYIVAGNHEMPRRLGEESPLALLKD-YVKILDGKDVINVNGEEIFICGTYYHKKSKREEMLDKLKNFESEAKNYKKKILMLHQGINPYIPLDYELEHFDLPKFSYYALGHIHKRILERFNDGILAYSGSTEIIYRNEYEDYKKEGKGFYLVDFSGNDLDISDIEKIDIECREFV |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3AV0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -108514 for 1243 contacts (-87.3/contact) +
2D Compatibility (PS) -18232 + (NN) -4079 + (LL) 12348
1D Compatibility (HY) -9600 + (ID) 1750
Total energy: -129827.0 ( -104.45 by residue)
QMean score : 0.324
|
|
|