Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAISKEEVLEYIGSLSVLELSELVKMFEEKFGVSATPTVVAGAAVAGGAAAESEEKTEFNVILADSGAEKIKVIKVVREITGLGLKEAKDATEKTPHVLKEGVNKEEAETIKKKLEEVGAKVEVK
1CTF Chain:A ((7-74))
---------------------------------------------------------EFDVILKAAGANKVAVIKAVRGATGLGLKEAKDLVESAPAALKEGVSKDDAEALKKALEEAGAEVEVK
General information:
TITO was launched using:
RESULT:
Template:
1CTF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23501 for 496 contacts (-47.4/contact) +
2D Compatibility (PS) -7559 + (NN) -2537 + (LL) 4984
1D Compatibility (HY) -4800 + (ID) 2200
Total energy: -35613.0 ( -71.80 by residue)
QMean score : 0.729
(partial model without unconserved sides chains):
PDB file :
Tito_1CTF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1CTF-query.scw
PDB file :
Tito_Scwrl_1CTF.pdb
: