Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLVLGISGASGIPLALRFLEKLPKEIE-IFVVASKNAHVVALEESNINLKNAMKD-LRPSATFFNEQDIHAS--IASGSYGIHKMAIIPASMDMVAKIAHGFGGDLISRSASVMLKEKRPLLIAPREMPLSAIMLENLLKLAHSNAIIAPPMMTYYTQSKTLEAMQDFLVGKWFDSLGIENDLYPRWGMN
2EJB Chain:A ((2-183))
QKIALCITGASGVIYGIKLLQVLEELDFSVDLVISRNAKVVLK-------EEV-LKGLK-NVRIHEENDFTSPLASGSRLVHYRGVYVVPCSTNTLSCIANGINKNLIHRVGEVALKERVPLVLLVREAPYNEIHLENMLKITRMGGVVVPASPAFYHKPQSIDDMINFVVGKLLDVLRIEHNL-------
General information:
TITO was launched using:
RESULT:
Template:
2EJB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -106687 for 1399 contacts (-76.3/contact) +
2D Compatibility (PS) -18679 + (NN) -11822 + (LL) 632
1D Compatibility (HY) -15200 + (ID) 2700
Total energy: -154456.0 ( -110.40 by residue)
QMean score : 0.418
(partial model without unconserved sides chains):
PDB file :
Tito_2EJB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2EJB-query.scw
PDB file :
Tito_Scwrl_2EJB.pdb
: