Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKFFLLKKFSEFLNTQTHFNLKRLNASSFLLETFSKEKHAFVVDLSAPYIGLSKKPPESVLKNTLALDFCLNKFTKNAKILQANVIDNDRILEIKGAKDLAYKSETFILRLEMIPK-KANLMILDQ----EKCVIEAFRFNDRV-AKNDILGALPPNIYEHQEEDLDFKGLLDILEKDFLSYQHKELEHKKNQIIKRLNAQKERLKEKLEKLEDPKTLQLEAKELQTQASLLLTYQHLINRRENRVILKDFEDKECMIEIDKSMPLNAFINKKFTLSKKKKQKSQFLYLEEENLKEKIAFKENQINYVRDAAEESVLEMFMPVKNSKIKRPMNGYEVLYYKDFKIGLGKNQKENIKLLQDARANDLWMHVRDIPGSHLIVFCQKNTPKDEVIMELAKMLIKMQKDAFNGYEIDYTQRKFVKIIKGAHVIYSKYRTISLKDT |
| 1Q77 Chain:A ((1-138)) | -----------------------------------------------------------------------------------------------------------------SNAMKVLLVLTDAYSDCEKAITYAVNFSEKLGAELDILAVL-EDVYNLERANVTFG----------LPFPPEIKEESKKRIERRLREVWEKLTGS----TEIPGVEYRIGPLSEEVKKFVE-----GKGYELVVWACYPSAY-LCKVIDGLNLASLIVK------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Q77.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 891 for 938 contacts (0.9/contact) +
2D Compatibility (PS) -14129 + (NN) -1217 + (LL) 24332
1D Compatibility (HY) -11200 + (ID) 1350
Total energy: -2673.0 ( -2.85 by residue)
QMean score : 0.278
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