Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------MKKFLSILSILVLALLVTACGSDSSDKKSAKKEEKMETVTYIADINGAKLEATFSHVGDNLRKVD---QKMVYPLTALGLESGANLDDATKKQLEEQVASQYSAYK-------------------ESKGASLETKFTDEALELTMSVDLYKADKDSVASLLGGTTDPKNVSLKETVKQFEAQGFKKKES-------- |
| 4YMU Chain:C ((1-214)) | MTVDFLSMVKYTPLFISGLIMTLKLTFLAVTIGVLMGLFIALMKMSSIKPIKLVASSYIEVIRGTPLLVQLLLIYNGLMQFGMNIPAFTAGVSALAINSSAYVAEIIRAGIQAVDPGQNEAARSLGMTHAMAMRYVIIPQAIKNILPALGNEFIVMLKESAIVSVIGFADLTRQADIIQSVTYRYFEPYIIIAAIYFVMTLTFSKLLSLFERRL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YMU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 24544 for 1201 contacts (20.4/contact) +
2D Compatibility (PS) -17482 + (NN) -7263 + (LL) 0
1D Compatibility (HY) -4800 + (ID) 1300
Total energy: -6301.0 ( -5.25 by residue)
QMean score : 0.231
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