Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKLTGIHHVSIF--TANARANFDFYTKIMGLRLVKKSVNQDDPYTYHLYYGDEIGSPGTALTFFEVPNMAKNHPSRNAISGLSLRVPSDEALHYWDKRLDEHRIFHSK-PI----DQFGRKIIRLKDTDGLPVNLISDETSTQVTEVTPWEDSL---VPAEYAIRGLGPVRFSVFKKEKTDRLLTKILGFERIGAYEDDDKLVTVFKTGNVGLGGEVHVESRPDLEQGNLGAGGIHHVAFRVPTDGDLIGWTEMIQDLGYKNSGYVDR---FYFHSLYFRESNGILIELATDEPGFQTDFTKEHGTYVDLPPHLEERREDILAHLKPLDTDK |
3VB0 Chain:A ((2-273)) | -SVKQLGYLIFECRADVLEQMVVVYQDIIGAVVERDEG----GR---ALVRL--DGRPFRIRLDP--------GPANRLAAIGWNV-DPSDLAAIAEQVEKACYSVVTADAELAADRAAAQVRQFADNDGFTHELYVESSFPT----DPVLESLFVCGEEANGIFGLGHLVVIVADRAKTQSFFTDVLGFGLSDRVTWPEADIFFLHCN--QRHHTVALSAPAL----GLKPGMVHHLMLEAKSKEQVDRAFAAVKRLGYDVLMTIGQHSNDKVYSFYMMAPAGFAVELGFGGQVIGDLES------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VB0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -101031 for 2051 contacts (-49.3/contact) +
2D Compatibility (PS) -28283 + (NN) -11230 + (LL) 3344
1D Compatibility (HY) -13600 + (ID) 1900
Total energy: -152700.0 ( -74.45 by residue)
QMean score : 0.426
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