Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAYPFNHKEFVAMMEQYNLKSNSITIPEHTILNDLVTENRDCVYLLKSGILAGYI--DFDNDKIYSIFTSNFFMGYYTIFDNSSLVLTYQTL--TECELIIYKKKDIEYSLSLFPE-NFSFQYTIMRTIAKHGYYKSLLQYRDKKDQLAFVFEMLVKILDIPVEDGVAVLPKSISTTVIKNYCTLSKAFFYSQLKELKEAGIISKVKLQWRI-NMEALSEKNNSIN---------------
1OMI Chain:A ((16-248))------GSEFKKYLETNGIKPKQFH-KKELIFNQ--WDPQEYCIFLYDGITKLTSISENGTIMNLQYYKGAFVIMSGFIDTETSVGYYNLEVISEQATAYVIKINELKELLSKNLTHFFYVFQTLQKQVSYSLAKFNDFSINGKLGSICGQLLILTYVYGKETPDGIKITLDNLTMQEL--------SAVSRIISKLKQEKVIVYKNSCFYVQNLDYLKRYAPKLDEWFYLACPATWGKLN


General information:
TITO was launched using:
RESULT:

Template: 1OMI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -108142 for 1447 contacts (-74.7/contact) +
2D Compatibility (PS) -21897 + (NN) -5034 + (LL) 1324
1D Compatibility (HY) -8400 + (ID) 1300
Total energy: -143449.0 ( -99.14 by residue)
QMean score : 0.372

(partial model without unconserved sides chains):
PDB file : Tito_1OMI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1OMI-query.scw
PDB file : Tito_Scwrl_1OMI.pdb: