Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MKKSERLNDMMLFLNDKNVFQLS---DIMTKYDISRSTAIRDVKSLEEI-GMPIYSERGRNGHYQVLRNRLLSPIVFNIDEVFA-------LYFSMLTLKAYETTPFHLSV-----EKLKTKFERCLS-AEKIEML----RKTEEVFSLGYIKHNNQCEFLDVILQFTMEEKVCQINYDKKGI-------------EKTYVVQFYNISSAYGQWYVT--SYNFETKRMQVFRCDRILELEENHAFEAKKLTDLKSETDYLYKKKDAINFEVEIASNGVDLFFKENYPSMKLNQEQ--GRNVIRGFYN---RGEEPFII-----NYLLGFGDKINMVQPDSLKEMLLNELKSLQN---------------------------HLQKLS--------------------- |
| 2X2Z Chain:A ((6-416)) | GNPFQANVEMKTFMERFNLTHHHQSGIYVDLGQDKEVD-GTLYREPAGLCPIWGKHIELQQPDRPPY---RNNFLEDVPTEKEYKQSGNPLPGGFNLNFVTPSGQRISPFPMELLENSNIKASTDLGRCAEFAFKTVAMDKNNKATKYRYPFVYDSKKRLCHILYVSMQLMEGKKYCSVKGEPPDLTWYCFKPRKSVTENHHLIYGSAYVGENPDAFISKCPNQALRGYRFGVWKKGRCLDYTELTDTVIERVESKAQCWVKTFENDGVASDQPHTYPLTSQASWNDWWPLHQSDQPHSGGVGRNYGFYYVDTTGEGKCALSDQVPDCLVSDSAAVSYTAAGSLSEETPNFIIPSNTPPTPETALQCTADKFPDSFGACDVQACKRQKTSCVGGQIQSTSVDCTADEQNEC |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2X2Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -50263 for 2360 contacts (-21.3/contact) +
2D Compatibility (PS) -31849 + (NN) 5196 + (LL) 588
1D Compatibility (HY) -3600 + (ID) 2600
Total energy: -82528.0 ( -34.97 by residue)
QMean score : 0.171
|
|
|