Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---MYQSLSNIIINLQANKDLLLQQDNEVDRIKSILPLVVARNSIIETLGRNPVWGISLTDDVNNLKIDNQLVTEVIPFDWNNETLYLCYFSDLESSNSPSEMGISFQLVNIFSLS
2Z5I Chain:I ((5-40))
MDAIKKKMQMLKLDKENALDRAEQLENEVARLKKLV--------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2Z5I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3391 for 125 contacts (27.1/contact) +
2D Compatibility (PS) -3449 + (NN) -1800 + (LL) 4740
1D Compatibility (HY) -800 + (ID) 350
Total energy: 1732.0 ( 13.86 by residue)
QMean score : 0.407
(partial model without unconserved sides chains):
PDB file :
Tito_2Z5I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Z5I-query.scw
PDB file :
Tito_Scwrl_2Z5I.pdb
: