Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LSYEPNTKETMQKIKELTSIPSPTGNTGKIIEKLAKDLDASKIPYRLNNKGGLIVTLPGKDETKHRMLTAHVDTLGAMVKEIKADGRLLLTLIGGYRFNAIEGEYCTIETSAGDLYSGTILMHQTSVHVYKD-AGTAERNDKNMEVRLDVKALDADKVRALGIEVGDFVSFDPRVQIINDEYIKSRHLDDKASVAILLQLINHIHENNLELPHTTHFLISNNEEIGYGGNSNIPA--ETVEYLAVDMGALGDGQ-------TSDEYTVSICAKDGSGPYHLGLRKHLVELAKKNNIDYKVDIYPFYASDASAAINAGNDIIHGLIGPGIDASHA-YERTHRDSLYHTEKLVYAYLFSNILK |
| 3ISX Chain:A ((11-342)) | -------HHMKELIRKLTEAFGPSGREEEVRSIILEELEGHIDGHRIDGLGNLIVWKGS--GEKKVILDAHIDEIGVVVTNVDDKGFLTIEPVGGVSPYMLLGKRIRFENG----TIGVVGM--EGETTEERQENVRKLSFDKLF--IDIGANSREEAQK-MCPIGSFGVYDSGFVEV-SGKYVSKAMDDRIGCAVIVEVFKRIK-----PAVTLYGVFSVQEEVGLVGASVAGYGVPADEAIAIDVTDSADTPKAIKRHAMRLSGGPALKVKDRASISSKRILENLIEIAEKFDIKYQMEVLTFGGTNAMGYQRTREGIPSATVSIPTRYVHSPSEMIAPDDVEATVDLLIRYLG----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ISX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -140116 for 2727 contacts (-51.4/contact) +
2D Compatibility (PS) -34862 + (NN) -18056 + (LL) 1348
1D Compatibility (HY) -12000 + (ID) 3250
Total energy: -206936.0 ( -75.88 by residue)
QMean score : 0.387
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