Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | METRNEKFRRLSEARM------------------TKVFSILNILRNQS----DKSKYTFSKSDIEELFGALEQKGEEIKEFFTSPITIKTVNLKNSFHYSVVDTSNDKEV-SFK-KLSTARVEKIFSLMNLIANLSNKSNYNYSDWEVE--------ELFSAYDEEVKKCKVFFE-EKRTVFKYS----------------------------------------- |
1QAG Chain:A ((31-255)) | -DVQKKTFTKWINARFSKSGKPPINDMFTDLKDGRKLLDLLEGLTGTSLPKERGSTRVHALNNVNRVLQVLHQNNVELVNIGGTDIVDGNHKLTLGLLWSIILHWQVKDVMKDVMSDLQQTNSEKILLSWVRQTTRPYSQVNVLNFTTSWTDGLAFNAVLHRHKPDLFSWDKVVKMSPIERLEHAFSKAQTYLGIEKLLDPEDVAVRLPDKKSIIMYLTSLFEVLP |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QAG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 40673 for 832 contacts (48.9/contact) +
2D Compatibility (PS) -15347 + (NN) -2734 + (LL) 208
1D Compatibility (HY) 4000 + (ID) 500
Total energy: 26300.0 ( 31.61 by residue)
QMean score : 0.246
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