Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSILDDYEKELLVISHQIIAYLIKSGV---NPSQAQDVTQDVFLQILESDFSLPL---DKIKAWMYRTTIRRYIDLYRRNKRYNEILQ----------------------------------------------------KEF--------------FIENNLYYTESEKFFELHEAILHLKKDYQTLIDLYYFNDFSIKEISEITGQSQSTIKIRLMRARREVKKYLEKDNFKI |
| 1RP3 Chain:A ((5-234)) | YSNQIEREELILKYLPLVKAIATNIKKHLPEDVDIRDLISYGVIGLIKAVDNLSTENPKRAEAYIKLRIKGAIYDYLRSLDFGSRQVREKERRIKEVVEKLKEKLGREPTDEEVAKELGISTEELFKTLDKINFSYILSLEEVFRDFARDYSELIPSSTNVEEEVIKRELTEKVKEAVSKLPEREKLVIQLIFYEELPAKEVAKILETSVSRVSQLKAKALERLREMLSN----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RP3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -37948 for 971 contacts (-39.1/contact) +
2D Compatibility (PS) -17135 + (NN) -7406 + (LL) 244
1D Compatibility (HY) -3600 + (ID) 1150
Total energy: -66995.0 ( -69.00 by residue)
QMean score : 0.453
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