Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MALFSKKDKYIRISPNKALGSSDKRSLPEVPDELFAKCPSCKHMIYQKDLGLAKICPACSYNFRISAQERLLLTVDEDSFEELFTGIETKDPLNFPNYREKLAATRQKTNLDEAVVTGLAKIKGQTTALAIMDSHFIMASMGTVVGEKLTRLFELATEKKLPIVIFTASGGARMQEGIMSLMQMAKVSAAVKRHSNQGLFYLTILTDPTTGGVTASFAMEGDIILAEPQ--ALVGFAGRRVIETTVREDLP-EGFQKAEFLL-EHGFVDAIINRT-ELRDCIAQLIAFHGNEVGHE |
| 1X0U Chain:A ((31-259)) | ------------------------------------------------------RIQFQHSKGKLTARERLALLFDDGKFNEIMTFA-TTRATEFGLD--------KQRFYGDGVVTGWGKVDGRTVFAYAQDFTVLGGSLGETHANKIVRAYELALKVGAPVVGINDSGGARIQEGALSLEGYGAVFKMN-VMASGVIPQITIMAGPAAGGAVYS-PALTDFIIMIKGDAYYMFVTGPEITKVVLGEEVSFQDLGGAVVHATKSGVVHFMVDSEQEAINLTKRLLSYLPSNNMEE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1X0U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -113933 for 1926 contacts (-59.2/contact) +
2D Compatibility (PS) -24344 + (NN) -10267 + (LL) 4288
1D Compatibility (HY) -8400 + (ID) 2700
Total energy: -155356.0 ( -80.66 by residue)
QMean score : 0.429
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