Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------MADISIISM----ILVVIVAFFAGLEGILDQFQIHQPLVACTLIGLVTGHLEAGI--------ILGGSLQMIALAWAN----IGAAVAPDAALASVAAAI------------ILVKSGDFTQKGINFAFSTAVPL--AIAGLF--------------------LTMIVRTISTALVHAGDKAASEG----------NFAAIERFHFIAL-LLQGLRIAFPAALLLAIPSSSV------QSILEAMPDWLNGGMQVG---GAMVVAVGYAM-------------------------------VINMMATREVWPFFALGFALAALNQLTLIAMGTIGVAIALIYISLSKMGGSKGTSNAGSNDPIGDILEDY------------- |
| 1K5H Chain:A ((1-398)) | MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRYAVMDDEASAKLLKTMLQQQGSRTEVLSGQQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAGKTILLANKESLVTCGRLFMDAVKQSKAQLLPVDSEHNAIFQSLPQPIQHNLGYADLEQNGVVSILLTGSGGPFRETPLRDLATMTPDQACRHPNWSMGRKISVDSATMMNKGLEYIEARWLFNASASQMEVLIHPQSVIHSMVRYQDGSVLAQLGEPDMRTPIAHTMAWPNRVNSGVKPLDFCKLSALTFAAPDYDRYPCLKLAMEAFEQGQAATTALNAANEITVAAFLAQQIRFTDIAALNLSVLEKMDMREPQCVDDVLSVDANAREVARKEVMRLAS |
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General information:
TITO was launched using:
| RESULT:
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Template: 1K5H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -232426 for 2031 contacts (-114.4/contact) +
2D Compatibility (PS) -28623 + (NN) -4354 + (LL) 0
1D Compatibility (HY) -7200 + (ID) 2200
Total energy: -274803.0 ( -135.30 by residue)
QMean score : 0.206
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