Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKQAETLTSLEQVLKQIKYSLDSYYSFCVKKGFVLKVIPVRENIEEVSYLLNMIESQKDTEISTYYVDKLSKQLKEFVKKLNSWEVKPLFTSEQLSKLTTYSTFLENKE
3N1E Chain:A ((2-80))
-DQWSMLRHFDHITKDYHDH---------IAEISAKLVAIMDSLFDKL--LSKYEV--KAPVPSPCFRNICKQMTKMHEAIF-----DLLPEEQTQMLFLRINASYKLH
General information:
TITO was launched using:
RESULT:
Template:
3N1E.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1609 for 396 contacts (-4.1/contact) +
2D Compatibility (PS) -8058 + (NN) -706 + (LL) 1756
1D Compatibility (HY) -4800 + (ID) 600
Total energy: -14017.0 ( -35.40 by residue)
QMean score : 0.454
(partial model without unconserved sides chains):
PDB file :
Tito_3N1E.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3N1E-query.scw
PDB file :
Tito_Scwrl_3N1E.pdb
: