Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKNKFLLVSIVFIIIFVVQPQNFQSLKNIFTQNDIASQLNISSSPEEKNDGLGTAYQTQNEDLKSKSFDGQHQVIVVNEKAQFTAEELSMRNGSWEKYDNLDFLNRVGVAEAMLGKELMPKEARQDISSVKPTGWKNKKITFNGKQDYLYNRSHLIGFQLSGENANVKNLFTGTRALNA-----NFNDDKSSMVYYENEVANYIKKT-NHHVRYRVTPLFKNVELVARGVRIEAQSIEDE----TIS-------------FDVYIFNGQPGYDIDYLTGSSEKIMITK |
| 2XGR Chain:A ((33-250)) | ------------------------------------------------------------------RTYPNVSHANT-HYKNTVSSKLLPFTANYQLQLGELDNLNRATFSHIQLQDRHETKDVR-------TKIW-------------VMNRGHLVGYQFCGLNDEPRNLVAMTAWLNTGAYSGANDSNPEGMLYYENRLDSWLALHPDFWLDYKVTPIYSGNEVVPRQIELQYVGIDSSGELLTIRLNSNKESIDENGVTTVILENSAPNINLDYLNGTATP----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2XGR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -22724 for 1272 contacts (-17.9/contact) +
2D Compatibility (PS) -18333 + (NN) -796 + (LL) 6404
1D Compatibility (HY) -12000 + (ID) 2300
Total energy: -49749.0 ( -39.11 by residue)
QMean score : 0.295
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