Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAIKQTQIKSSEKRSLGRKQDKKKGNQEY--FDLHSCVELLDVKAIIDNRQAYIQLVDYGY-----LQLMEIPGKDLGSLSYNEIRRTIDNFEKWLTDFNTDIQIETTTLPTNTDTQIMDLRHHLSLVRQEMAKLLPDSRRYMQLHDRELLLRNDIQVEESIQQEIYNTEFILWLFAPTTTE-----LDELVRKAKSYGNNDFVPQEITKVKKEQIIKQFNNMNEKV----------------- |
3LYF Chain:A ((1-245)) | MDNYQELAIQFAAQAVRNEIEQWVREFAYQGFDARRVIELLKQYGGADWEKDAKKMIVLALTRGNKPRRMMMKMSKEGKATVEALINKYKLKEGNPSRDELTLSRVAAALAGRTCQALVVLSEWLPVTGTTMDGLSPAYPRHMMHPSFAGMVDPSLPGDYLRAILDAHSLYLLQFSRVINPNLRGRTKEEVAATFTQPMNAAVNSNFISHEKRREFLKAFGLVDSNGKPSAAVMAAAQAYKTAA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LYF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 19050 for 1628 contacts (11.7/contact) +
2D Compatibility (PS) -21759 + (NN) -1073 + (LL) 0
1D Compatibility (HY) -2800 + (ID) 1400
Total energy: -7982.0 ( -4.90 by residue)
QMean score : 0.217
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