Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSQKNNRLGYFGRQKQAFDDYVFLTKAKMKAERDYFASEG--ESDPERLAAQKARDQEFLKSLKKVGIGFIAFLLFYAIVRTVLGLW
3JBS Chain:A ((117-152))
------------------------------KEANLFPEQQNKEIKAERVEDQKVVDKALIAEIKKTPLLKQYLSASFSLKNGDKPHM
General information:
TITO was launched using:
RESULT:
Template:
3JBS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 8065 for 124 contacts (65.0/contact) +
2D Compatibility (PS) -3688 + (NN) -2787 + (LL) 2076
1D Compatibility (HY) -2000 + (ID) 500
Total energy: 1166.0 ( 9.40 by residue)
QMean score : 0.772
(partial model without unconserved sides chains):
PDB file :
Tito_3JBS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3JBS-query.scw
PDB file :
Tito_Scwrl_3JBS.pdb
: