Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIELGITTFGETTILEETNQSYSHPERIRQLVAEIELADQVGLDVYGIGEHHREDF----AVSAPEIVLAAGAVRTNNIRLSSAVTILSS-NDPIRVYQQFSTIDALSNGRAEIMAGRGSFIESFPLFGYD--LADYDDLFNEKMDMLLAINSAT-NLDWKGH-LTQTVNERPIYPRALQRQLPIWVATGGNVDSTIRIAEQGLPIVYATIGGNPKAFR-QLVHIYKEVGSRNGHKPEQLKVAAHSWGWIEEDNQTAIDRYFFPTKQTVDNIAKGRPHWSEMTK---EQY-LRSVGPEGAIFVGSPEVVAHKIIGLVEALELDRFMLHLPVGSMPHKDVLNAIKLYGKEVAPIVRKYFEKN |
| 1RHC Chain:A ((2-330)) | KTQIGYFASLEQY-------------RPMDALEQAIRAEKVGFDSVWVDDHFHPWYHDNAQSAQAWAWMGAALQATKKVFISTCITCPIMRYNPAIVAQTFATLRQMYPGRVGVAVGAGEAMNEVPVTGEWPSVPVRQDMTVEAVKVMRMLWESDKPVTFKGDYFTL--DKAFLYTKPDD-EVPLYFSGM-GPKGAKLAGMYGDHLMTVAA--APSTLKNVTIPKFEEGAREAGKDPSKMEHAMLIWYSVDPDYDKAVEALRFWAGCLVPSMFK-YKVYDPKEVQLHANLVHCDTIKENYMCATDAEEMIKEIERFKE-AGINHFCLGNSS-----PDVNFGIDIF-KEVIPAVRD----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RHC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -118707 for 2744 contacts (-43.3/contact) +
2D Compatibility (PS) -33066 + (NN) -8159 + (LL) 576
1D Compatibility (HY) -8400 + (ID) 2850
Total energy: -170606.0 ( -62.17 by residue)
QMean score : 0.443
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